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189
Voted
BMCBI
2010
125views more  BMCBI 2010»
15 years 7 months ago
Visualisation tool for peptide fractionation data in proteomics: application to OFFGEL isoelectric focussing
Background: OFFGEL isoelectric focussing (IEF) has become a popular tool in proteomics to fractionate peptides or proteins. As a consequence there is a need for software solutions...
David-Olivier D. Azulay, Hendrik Neubert, Mireia F...
ICPPW
2009
IEEE
15 years 4 months ago
A Scalable Parallel Approach for Peptide Identification from Large-Scale Mass Spectrometry Data
Identifying peptides, which are short polymeric chains of amino acid residues in a protein sequence, is of fundamental importance in systems biology research. The most popular appr...
Gaurav Ramesh Kulkarni, Ananth Kalyanaraman, Willi...
225
Voted
NAR
2011
203views Computer Vision» more  NAR 2011»
14 years 9 months ago
Laminin database: a tool to retrieve high-throughput and curated data for studies on laminins
The Laminin(LM)-database, hosted at http://www .lm.lncc.br, is the first database focusing a noncollagenous extracellular matrix protein family, the LMs. Part of the knowledge ava...
Daiane C. F. Golbert, Leandra Linhares-Lacerda, Lu...
BMCBI
2008
126views more  BMCBI 2008»
15 years 7 months ago
NITPICK: peak identification for mass spectrometry data
Background: The reliable extraction of features from mass spectra is a fundamental step in the automated analysis of proteomic mass spectrometry (MS) experiments. Results: This co...
Bernhard Y. Renard, Marc Kirchner, Hanno Steen, Ju...
224
Voted
BMCBI
2010
121views more  BMCBI 2010»
15 years 7 months ago
Knowledge-based annotation of small molecule binding sites in proteins
Background: The study of protein-small molecule interactions is vital for understanding protein function and for practical applications in drug discovery. To benefit from the rapi...
Ratna R. Thangudu, Manoj Tyagi, Benjamin A. Shoema...