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BMCBI
2010
105views more  BMCBI 2010»
15 years 6 months ago
A knowledge-guided strategy for improving the accuracy of scoring functions in binding affinity prediction
Background: Current scoring functions are not very successful in protein-ligand binding affinity prediction albeit their popularity in structure-based drug designs. Here, we propo...
Tiejun Cheng, Zhihai Liu, Renxiao Wang
BMCBI
2010
123views more  BMCBI 2010»
15 years 6 months ago
A new protein binding pocket similarity measure based on comparison of clouds of atoms in 3D: application to ligand prediction
Background: Predicting which molecules can bind to a given binding site of a protein with known 3D structure is important to decipher the protein function, and useful in drug desi...
Brice Hoffmann, Mikhail Zaslavskiy, Jean-Philippe ...

Publication
141views
14 years 4 months ago
Measures of Diversity for Populations and Distances Between Individuals with Highly Reorganizable Genomes
In this paper we address the problem of defining a measure of diversity for a population of individuals whose genome can be subjected to major reorganizations during the evolution...
Claudio Mattiussi, Markus Waibel, Dario Floreano
MM
2009
ACM
177views Multimedia» more  MM 2009»
16 years 1 months ago
Transfer non-metric measures into metric for similarity search
Similarity search is widely used in multimedia retrieval systems to find the most similar ones for a given object. Some similarity measures, however, are not metric, leading to e...
Danzhou Liu, Kien A. Hua
DAGSTUHL
1994
15 years 8 months ago
Function-Based Object Recognition
Functionality-based recognition systems recognize objects at the category level by reasoning about how well the objects support the expected function. Such systems naturally assoc...
Louise Stark, Kevin W. Bowyer