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BMCBI
2010
175views more  BMCBI 2010»
15 years 7 months ago
Towards high performance computing for molecular structure prediction using IBM Cell Broadband Engine - an implementation perspe
Background: RNA structure prediction problem is a computationally complex task, especially with pseudo-knots. The problem is well-studied in existing literature and predominantly ...
S. P. T. Krishnan, Sim Sze Liang, Bharadwaj Veerav...
BMCBI
2008
211views more  BMCBI 2008»
15 years 7 months ago
CPSP-tools - Exact and complete algorithms for high-throughput 3D lattice protein studies
Background: The principles of protein folding and evolution pose problems of very high inherent complexity. Often these problems are tackled using simplified protein models, e.g. ...
Martin Mann, Sebastian Will, Rolf Backofen
CORR
2008
Springer
91views Education» more  CORR 2008»
15 years 7 months ago
Particle Filtering for Large Dimensional State Spaces with Multimodal Observation Likelihoods
We study efficient importance sampling techniques for particle filtering (PF) when either (a) the observation likelihood (OL) is frequently multimodal or heavy-tailed, or (b) the s...
Namrata Vaswani
BMCBI
2006
152views more  BMCBI 2006»
15 years 7 months ago
A two-stage approach for improved prediction of residue contact maps
Background: Protein topology representations such as residue contact maps are an important intermediate step towards ab initio prediction of protein structure. Although improvemen...
Alessandro Vullo, Ian Walsh, Gianluca Pollastri
IJSN
2006
65views more  IJSN 2006»
15 years 7 months ago
The loop fallacy and deterministic serialisation in tracing intrusion connections through stepping stones
: In order to conceal their identity and origin, network based intruders seldom attack directly from their own hosts, but rather stage their attacks through intermediate `stepping ...
Xinyuan Wang
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