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SIGMOD
2010
ACM
196views Database» more  SIGMOD 2010»
15 years 7 months ago
GAIA: graph classification using evolutionary computation
Discriminative subgraphs are widely used to define the feature space for graph classification in large graph databases. Several scalable approaches have been proposed to mine disc...
Ning Jin, Calvin Young, Wei Wang
199
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BMCBI
2010
124views more  BMCBI 2010»
15 years 7 months ago
Estimation and efficient computation of the true probability of recurrence of short linear protein sequence motifs in unrelated
Background: Large datasets of protein interactions provide a rich resource for the discovery of Short Linear Motifs (SLiMs) that recur in unrelated proteins. However, existing met...
Norman E. Davey, Richard J. Edwards, Denis C. Shie...
BMCBI
2008
80views more  BMCBI 2008»
15 years 7 months ago
Computational evaluation of TIS annotation for prokaryotic genomes
Background: Accurate annotation of translation initiation sites (TISs) is essential for understanding the translation initiation mechanism. However, the reliability of TIS annotat...
Gang-Qing Hu, Xiaobin Zheng, Li-Ning Ju, Huaiqiu Z...
BMCBI
2006
87views more  BMCBI 2006»
15 years 7 months ago
Computational expression deconvolution in a complex mammalian organ
Background: Microarray expression profiling has been widely used to identify differentially expressed genes in complex cellular systems. However, while such methods can be used to...
Min Wang, Stephen R. Master, Lewis A. Chodosh
BMCBI
2007
157views more  BMCBI 2007»
15 years 7 months ago
Statistical learning of peptide retention behavior in chromatographic separations: a new kernel-based approach for computational
Background: High-throughput peptide and protein identification technologies have benefited tremendously from strategies based on tandem mass spectrometry (MS/MS) in combination wi...
Nico Pfeifer, Andreas Leinenbach, Christian G. Hub...