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POPL
2006
ACM
16 years 7 months ago
A hierarchical model of data locality
In POPL 2002, Petrank and Rawitz showed a universal result-finding optimal data placement is not only NP-hard but also impossible to approximate within a constant factor if P = NP...
Chengliang Zhang, Chen Ding, Mitsunori Ogihara, Yu...
RECOMB
2006
Springer
16 years 7 months ago
Simulating Protein Motions with Rigidity Analysis
Abstract. Protein motions, ranging from molecular flexibility to largescale conformational change, play an essential role in many biochemical processes. Despite the explosion in ou...
Shawna L. Thomas, Xinyu Tang, Lydia Tapia, Nancy M...
RECOMB
2006
Springer
16 years 7 months ago
Genome-Wide Discovery of Modulators of Transcriptional Interactions in Human B Lymphocytes
Abstract. Transcriptional interactions in a cell are modulated by a variety of mechanisms that prevent their representation as pure pairwise interactions between a transcription fa...
Kai Wang, Ilya Nemenman, Nilanjana Banerjee, Adam ...
STOC
2006
ACM
92views Algorithms» more  STOC 2006»
16 years 7 months ago
On the importance of idempotence
Range searching is among the most fundamental problems in computational geometry. An n-element point set in Rd is given along with an assignment of weights to these points from so...
Sunil Arya, Theocharis Malamatos, David M. Mount
STOC
2006
ACM
129views Algorithms» more  STOC 2006»
16 years 7 months ago
Optimal phylogenetic reconstruction
One of the major tasks of evolutionary biology is the reconstruction of phylogenetic trees from molecular data. The evolutionary model is given by a Markov chain on the true evolu...
Constantinos Daskalakis, Elchanan Mossel, Sé...
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